Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905554.1_cds_XP_016455803.1_49699
CDS Infomation

[gene=LOC107779822] [db_xref=GeneID:107779822] [protein=uncharacterized protein LOC107779822 isoform X2] [protein_id=XP_016455803.1] [location=join(9543..9581,10875..12323,12609..13076)] [gbkey=CDS]
Sequence

ATGTCTTACAATGTTCTTCTAAATTTGTTCCGGCAAAAGCGAACATGTGCTATTTGCCTT
GGGAGTATGAAACCTGGGAATGGTCAGGCCATATTCACTGCTGAATGCTCCCACTCCTTC
CACTTCAGCTGCATCGCCAACAGTGTTAAGCATGGAAACTACCTCTGCCCTATCTGCAGA
TGCAAATGGAAAGAGATTCCTCTCATGTCGTCCTTCAGTACTGATACAACCATTAACAAT
GCAGGACGGACTCGTGTCTCTCCACTTGAAGATCAACCACCGGTATCTCTGCCCCTTCCT
GAGCCCCTTCACTTCTCTGATGATGAACCTCTTCCCAGCATTACCGTGGATCAGACCTCC
TCCCCTTCCACCATTCATTCAGAAAGAGTAGTCTTGAGAGCTTTTCCAGAATTTTCTGCT
GTTGCTGCTTCTGAAGCGGTGTCAAGATTTGCTGTTCTTGTTGGAGTAAGGGCACCTCCA
CTTGCTGATGATGCTCGGCACCAAGAGCGTGCGCCTATCGACCTGGTCACAGTTCTAGAT
GTTAGTGGCAGCATGGCTGGATCAAAATTGGCTCTCTTGAAGCAAGCAGTTTGTTTTGTC
ATAGATAACTTGGGACCTTCTGACCGTCTAGCTGTTGTTACCTTTTCATCTGGAGCTCAA
AGAAACTTCCCCTTGCGAAGGATGACAGAGCAGGGGCGTCGAGAGGCTGTACAGGCTGTC
AATTCCATCTCAGCTAATGGTGGAACAAATATCGTAGAAGGACTCAAGAAAGGAGTTCGA
GTTCTTGAAGAAAGGCGTGAAAGGAATCCAGTTGCTAGTATTGTTCTCTTGTCAGATGGG
AGAGACACCTATAACGGAGATAATGCCAACCAACGTCACAGTCCTCGGAATCGTAGATCC
TCGAATGCAACATCAGGTCCAGAATATCTGAATCTGTTGCCTTCTTCCATTTGTCCTCGC
AATAGAGAAGCACTAGCAGCAGACCAGCTGCCAACTTTTCATGTACATACATTTGGGTTT
GGGTTAGACCATGATTCTTCTGCTATGCATGCTATCTCAGATGCATCGGGTGGTACATTT
TCATTCATTGAGACAGTTGGTACTGTTCAAGATGCCTTTGCAATGTGTATTGGTGGTCTC
CTCAGTGTTGTAGCTCAGGAATTAAAACTTACTGTTAGGTCAGCATCACGTGGAGTGGAA
ATTGGTTCCATCCCTTCGGGACGATATACAAGTGAAATTTCTGAACAAGGAAAGCAAGGT
CTAATAAACATTGGGAACCTGTATGCAGATGAGGAGAAAGAATTCCTTGTCTACTTGTCT
GTTCCCTCGGCTGAAATTGATGGAAGCGCAACAAAGACATCTCTGTTGAAAATTACATGT
GGTTACAAGAATAGCACGTCTGAAGAAATGGTCAGTGTGGAGGGTGAGACAGTTGAGATA
CGTCGGCCACCAGTGCTGTCTCCTACGGATGTGCTAGTAAGTCGTGAGGTTGATAGGCAG
ATAAACAGGCTGGCAGTAGCAGAAACCATTGCAGAGGCACAACATATGGCAGAAAATGGA
AATCTTGAGGCTGCTCAAGCCGTTCTAGGCAACAGAAGAACCTCTCTTCTATCTTCTGTA
TCTGCCCAAGCAGGTGATGCTCTTTGTAACTGGCTTGACACTGAACTGACTGAAATCAGA
GAGAGGATGGCGAGCAGGGAACGCTATGAACAAACAGGACGCGCTTATGTCCTCTCGGGT
TTGAGCTCACATTCTTGGCAAAGAGCCACAACTAGAGGAGACACAACGACACAAATAATA
TCGCAAGGTGGTAGCTCAAGCAACAGTGGTGCAATTGGCTATGAAACTCCATCTATGGTT
AACATGGTCTCAAAGTCACAGAATCTAAGTCTTGCCAATCGTGTTGAACAGGTTCCTCGT
CCCAACAAGACATGCAACTTAATTCCAAGATCTTAG

Peptide Sequence

PEP ID

XP_016455803.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107779822 isoform X2 [Nicotiana tabacum]
Sequence

MSYNVLLNLFRQKRTCAICLGSMKPGNGQAIFTAECSHSFHFSCIANSVKHGNYLCPICR
CKWKEIPLMSSFSTDTTINNAGRTRVSPLEDQPPVSLPLPEPLHFSDDEPLPSITVDQTS
SPSTIHSERVVLRAFPEFSAVAASEAVSRFAVLVGVRAPPLADDARHQERAPIDLVTVLD
VSGSMAGSKLALLKQAVCFVIDNLGPSDRLAVVTFSSGAQRNFPLRRMTEQGRREAVQAV
NSISANGGTNIVEGLKKGVRVLEERRERNPVASIVLLSDGRDTYNGDNANQRHSPRNRRS
SNATSGPEYLNLLPSSICPRNREALAADQLPTFHVHTFGFGLDHDSSAMHAISDASGGTF
SFIETVGTVQDAFAMCIGGLLSVVAQELKLTVRSASRGVEIGSIPSGRYTSEISEQGKQG
LINIGNLYADEEKEFLVYLSVPSAEIDGSATKTSLLKITCGYKNSTSEEMVSVEGETVEI
RRPPVLSPTDVLVSREVDRQINRLAVAETIAEAQHMAENGNLEAAQAVLGNRRTSLLSSV
SAQAGDALCNWLDTELTEIRERMASRERYEQTGRAYVLSGLSSHSWQRATTRGDTTTQII
SQGGSSSNSGAIGYETPSMVNMVSKSQNLSLANRVEQVPRPNKTCNLIPRS

Transcript Sequence

Gene sequence data has not been registered.